Rewiring TM

Now that I have the back half of my boat empty, I am thinking about putting in new wires for the trolling motor. It looks like the current TM wires are traveling down the center of the boat. I haven't completely traced them but if my memory serves me right, they came down from the bow on the center line as well. I'd like to run them down the port side gulwale. Has anyone done this? My current set up is giving me sonar interference and I want to get a little more distance from my fishfinders wires.